Publications | Ljungman Lab
Publications
2026
Isoform- and pathway-specific regulation of post-transcriptional RNA processing in human cells
Genome Res 26 Mar 2026 (Journal Article)
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BRD4-mediated ER membrane contact creates functionally distinct mitochondrial subtypes
Molecular Cell 86(5):917-936.e12 05 Mar 2026 (Journal Article)
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CFAP20 salvages arrested RNAPII from the path of co-directional replisomes
Nature 650(8103):1025-1034 26 Feb 2026 (Journal Article)
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Divergent condensates tune transcriptional responses during stress
13 Feb 2026 (Preprint)
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Abstract PR003: KLIPP: Targeting fusion oncogenes with CRISPR
Cancer Research 86 (1_Supplement): pr003-pr003 13 Jan 2026 (Journal Article)
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An expanded registry of candidate cis-regulatory elements
Nature 01 Jan 2026 (Journal Article)
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2025
Genetic variants affecting RNA stability influence complex traits and disease risk
Nature Genetics 57(10):2578-2588 01 Oct 2025 (Journal Article)
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Autophagy Upregulation in Mutant Isocitrate Dehydrogenase 1 (IDH1) Glioma Uncovers a Novel Therapeutic Target
Res Sq 11 Sep 2025 (Journal Article)
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Epigenetic Reprogramming of Autophagy Leads to Uncovering a Novel Therapeutic Target for Mutant IDH1 Astrocytomas
14 Jun 2025 (Preprint)
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Abstract 6371: KLIPP: Precision targeting of fusions and amplified oncogenes using CRISPR
Cancer Research 85(8_Supplement_1):6371-6371 21 Apr 2025 (Journal Article)
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PSP205, a Novel Phenyl Sulfonyl Piperidine, Induces Apoptotic Cell Death in Colon Cancer by Modulating Coat Protein Complex-Mediated Vesicle Trafficking
ACS Pharmacology and Translational Science 8(4):1072-1086 11 Apr 2025 (Journal Article)
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IL-1 signaling enrichment in inflammatory skin disease loci with higher-risk allele frequencies in African ancestry
23 Jan 2025 (Preprint)
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2024
STK19 facilitates the clearance of lesion-stalled RNAPII during transcription-coupled DNA repair
Cell 187(25):7107-7125.e25 12 Dec 2024 (Journal Article)
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PHF6 cooperates with SWI/SNF complexes to facilitate transcriptional progression
Nature Communications 15(1) 01 Dec 2024 (Journal Article)
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Ascitic Shear Stress Activates GPCRs and Downregulates Mucin 15 to Promote Ovarian Cancer Malignancy
25 Nov 2024 (Preprint)
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Characterizing nascent transcription patterns of PROMPTs, eRNAs, and readthrough transcripts in the ENCODE4 deeply profiled cell lines
03 May 2024 (Preprint)
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Abstract 6569: KLIPP: Precision targeting of cancer with CRISPR
Cancer Research. American Association for Cancer Research (AACR). 84: 6569-6569. 22 Mar 2024 (Proceeding / Abstract / Poster)
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Abstract A001: Silencing of EYA4 regulates stemness in H3K27M-mutant diffuse midline glioma
Cancer Research. American Association for Cancer Research (AACR). 84: a001-a001. 04 Mar 2024 (Proceeding / Abstract / Poster)
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Targeting DNA Repair and Survival Signaling in Diffuse Intrinsic Pontine Gliomas to Prevent Tumor Recurrence
(Journal Article)
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