Santhosh A Upadhyaya, MBBS
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About
My research focuses on advancing the clinical care of children with brain tumors, with a special interest in patients with atypical teratoid/rhabdoid
tumors (AT/RT) and ependymoma.
Qualifications
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Pediatric Neuro-Oncology FellowSt. Jude Children's Research Hospital, Memphis, United States
2015 - 2016
Clinical Fellowship
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Pediatric Hematology Oncology FellowC. S. Mott Children's Hospital, Ann Arbor, United States
2012 - 2015
Clinical Fellowship
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Pediatric ResidentSt. John Hospital & Medical Center, Detroit, United States
2009 - 2012
Residency
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Pediatric ResidentKasturba Medical College, Manipal, India
2001 - 2004
Residency
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MBBSKasturba Medical College, Mangalore, India
1994 - 2000
Research Overview
My current and ongoing research is focused on translational studies and clinical trials for children with ependymoma and ATRT. Young children with brain tumors continue to have poor outcomes compared to those with other cancers in this age group. However, a better understanding of the biological and molecular aspects of pediatric brain tumors more recently are transforming the care of these children. I have analyzed the outcomes of treatment for ATRT and ependymoma in children, with special emphasis on combining traditional modes of therapy, such as surgery, chemotherapy, and radiation therapy, with molecularly targeted therapy. By identifying clinical and molecular risk factors associated with poor outcomes in these children, we can tailor therapy to improve outcomes in those at highest risk of treatment failures.
Recent Publications
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Siada R, Banerjee K, Malhotra P, Ibrahim M, Moreira DC, Prensner JR, Upadhyaya SA. Cancers, 2026 Apr 8; 18 (7): 1171Journal ArticlePediatric Spinal Atypical Teratoid Rhabdoid Tumor: Recent Advances in Biology and Management Options
DOI:10.3390/cancers18071171 -
Malhotra V, Lieberman AP, Prensner JR, Quinonez SC, Muraszko K, Marupudi NI, Upadhyaya SA. Pediatr Blood Cancer, 2026 Mar 15; e70215Journal ArticleFGFR1:TACC1-Fused Pilocytic Astrocytoma in a Child With Muenke Syndrome: A Case Report.
DOI:10.1002/1545-5017.70215 PMID: 41834352 -
Smith KS, Fischer TT, Han K, Kostecka A, Lin H, Senfter D, Soliman T, Stepien N, Volz S, Schwarz N, Wedig T, Madlener S, Haberler C, Dhanda SK, Upadhyaya SA, Blackburn PR, Schmook MT, de Bont J, Haapasalo H, Dargvainiene J, Leypoldt F, Pfister SM, Hulleman E, Orr BA, Gajjar A, Robinson GW, Haapasalo J, Nordfors K, Gojo J, Pajtler KW, Maass KK, Northcott PA. Nature Cancer, 2026 Jan 1;Journal ArticleM-PACT leverages cell-free DNA methylomes to achieve robust classification of pediatric brain tumors
DOI:10.1038/s43018-026-01115-4 PMID: 41703322 -
Refaat A, Cho HP, Williams J, Stripay J, Blankenship K, Mercer KS, Devries R, Connelly M, Ganguly D, Robinson S, Savage E, Twarog NR, Attery A, Laha D, Yu K, Poudel S, Dhanda SK, Stewart CF, Freeman BB, Roberts CWM, Tinkle C, Stewart EA, Upadhyaya SA, Shelat AA, Roussel MF. Neuro-Oncology Pediatrics, 2025 Dec 16;Journal ArticleTargeting the p53 Pathway to Treat Atypical Teratoid Rhabdoid Tumors
DOI:10.1093/neuped/wuaf018 -
Geoerger B, Moreno L, Bouffet E, Upadhyaya SA, André N, Aerts I, Plant-Fox AS, Roughton M, Russo M, Hargrave D. Neuro Oncology Practice, 2025 Dec 1; 12 (6): 1099 - 1111.Journal ArticleDabrafenib in pediatric patients with BRAF V600 mutation–positive high-grade glioma: Results from a phase 1/2a single-arm study
DOI:10.1093/nop/npaf061 -
Bagchi A, Upadhyaya SA, Dhanda S, Billups C, Baxter P, Bendel A, Aguillera D, Kilburn L, Crawford J, Partap S, Hanzlik E, Tran Q, Breuer A, Qi W, Lu C, Singh A, Richardson M, Soans E, Klimo P, Zhou X, Thomas AO, Orr B, Merchant T, Robinson GW, Gajjar A. Neuro-Oncology, 2025 Nov 12; 27 (Supplement_5): v145 - v146.Journal ArticleCTP-03. A Phase 2 study of alisertib in combination therapy for newly diagnosed Atypical Teratoid/Rhabdoid Tumor (AT/RT)- Results from SJATRT strata B and C
DOI:10.1093/neuonc/noaf201.0575 PMID: PMC12600722 -
Wadden J, Adam T, Lau B, Cartaxo R, Wink K, Niculcea M, Kong S, John V, Becker N, Tripathy A, Serhan H, Merrill N, Merajver S, Upadhyaya S, Heth J, Muraszko K, Garton H, Marupudi N, Magge S, Kumar-Sinha C, Nazarian J, Al-Holou W, Venneti S, Koschmann C. Neuro-Oncology Pediatrics, 2026 Mar 14; 1 (Supplement_1):Proceeding / Abstract / PosterPATH-02. Molecular characterization of brain tumors from stereotactic needle biopsy surgical waste
DOI:10.1093/neuped/wuaf001.281 -
Spruit J, Franson A, Keefer T, Calvert R, Koschmann C, Louttit E, Robertson P, Upadhyaya S. 2025 Feb 5;Proceeding / Abstract / PosterStandardized Integration of Palliative Care Services in a Pediatric Neuro-Oncology Clinic