Publications

Joint Design of RF and Gradient Waveforms via Auto-differentiation for 3D Tailored Excitation in MRI
Luo, T, Noll, DC, Fessler, JA, Nielsen, J-F, IEEE Trans Med Imaging, 2021 Dec; DOI:10.1109/TMI.2021.3083104
PMID: 34029188
Step-adjusted tree-based reinforcement learning for evaluating nested dynamic treatment regimes using test-and-treat observational data
Tang, M, Wang, L, Gorin, MA, Taylor, JMG, Stat Med, 2021 Nov; DOI:10.1002/sim.9177
PMID: 34490942
Accounting for not-at-random missingness through imputation stacking
Beesley, LJ, Taylor, JMG, Stat Med, 2021 Nov; DOI:10.1002/sim.9174
PMID: 34459011
Machine-Learning-Assisted Microfluidic Nanoplasmonic Digital Immunoassay for Cytokine Storm Profiling in COVID-19 Patients
Gao, Z, Song, Y, Hsiao, TY, He, J, Wang, C, Shen, J, MacLachlan, A, Dai, S, Singer, BH, Kurabayashi, K, Chen, P, ACS Nano, 2021 Nov; DOI:10.1021/acsnano.1c06623
PMID: 34714639
Bayesian inference of dependent kappa for binary ratings
Sen, A, Li, P, Ye, W, Franzblau, A, Stat Med, 2021 Nov; DOI:10.1002/sim.9165
PMID: 34542193
Leveraging machine learning essentiality predictions and chemogenomic interactions to identify antifungal targets
Fu, C, Zhang, X, Veri, AO, Iyer, KR, Lash, E, Xue, A, Yan, H, Revie, NM, Wong, C, Lin, Z-Y, Polvi, EJ, Liston, SD, VanderSluis, B, Hou, J, Yashiroda, Y, Gingras, A-C, Boone, C, O'Meara, TR, O'Meara, MJ, Noble, S, Nat Commun, 2021 Nov; DOI:10.1038/s41467-021-26850-3
PMID: 34764269
Dynamic stochastic deep learning approaches for predicting geometric changes in head and neck cancer
Pakela, JM, Matuszak, MM, Ten Haken, RK, McShan, DL, El Naqa, I, Phys Med Biol, 2021 Nov; DOI:10.1088/1361-6560/ac2b80
PMID: 34587597
Comparative analysis of molecular fingerprints in prediction of drug combination effects
Zagidullin, B, Wang, Z, Guan, Y, Pitkänen, E, Tang, J, Brief Bioinform, 2021 Nov; DOI:10.1093/bib/bbab291
PMID: 34401895
Intensive and app-delivered occupational therapy to improve upper extremity function in early diffuse cutaneous systemic sclerosis: A pilot two-arm trial
Murphy, SL, Barber, M, Huang, S, Sabbagh, M, Cutter, G, Khanna, D, Rheumatology (Oxford), 2021 Nov; DOI:10.1093/rheumatology/keab339
PMID: 33839775
Comparison of Teleintegrated Care and Telereferral Care for Treating Complex Psychiatric Disorders in Primary Care: A Pragmatic Randomized Comparative Effectiveness Trial
Fortney, JC, Bauer, AM, Cerimele, JM, Pyne, JM, Pfeiffer, P, Heagerty, PJ, Hawrilenko, M, Zielinski, MJ, Kaysen, D, Bowen, DJ, Moore, DL, Ferro, L, Metzger, K, Shushan, S, Hafer, E, Nolan, JP, Dalack, GW, Unützer, J, JAMA Psychiatry, 2021 Nov; DOI:10.1001/jamapsychiatry.2021.2318
PMID: 34431972
Strengths and Limitations of Registries in Surgical Oncology Research
Kamarajah, SK, Nathan, H, J Gastrointest Surg, 2021 Nov; DOI:10.1007/s11605-021-05094-y
PMID: 34506025
Non-English Language Resources and Readability of Kidney Transplant Center Websites in the United States
Olmeda Barrientos, R, Valbuena, VSM, Jacobson, CE, Santos-Parker, KS, Anderson, MS, Waits, SA, Santos-Parker, JR, JAMA Netw Open, 2021 Nov; DOI:10.1001/jamanetworkopen.2021.34236
PMID: 34762114
Reporting guidelines for human microbiome research: the STORMS checklist
Mirzayi, C, Renson, A, Genomic Standards Consortium, Array, Massive Analysis and Quality Control Society, Array, Zohra, F, Elsafoury, S, Geistlinger, L, Kasselman, LJ, Eckenrode, K, van de Wijgert, J, Loughman, A, Marques, FZ, MacIntyre, DA, Arumugam, M, Azhar, R, Beghini, F, Bergstrom, K, Bhatt, A, Bisanz, JE, Braun, J, Nat Med, 2021 Nov; DOI:10.1038/s41591-021-01552-x
PMID: 34789871
Surviving Sepsis Campaign: International Guidelines for Management of Sepsis and Septic Shock 2021.
Evans, L, Rhodes, A, Alhazzani, W, Antonelli, M, Coopersmith, CM, French, C, Machado, FR, Mcintyre, L, Ostermann, M, Prescott, HC, Schorr, C, Simpson, S, Wiersinga, WJ, Alshamsi, F, Angus, DC, Arabi, Y, Azevedo, L, Beale, R, Beilman, G, Belley-Cote, E, Crit Care Med, 2021 Nov; DOI:10.1097/CCM.0000000000005337
PMID: 34605781
Assessment of Renal Cell Carcinoma by Texture Analysis in Clinical Practice: A Six-Site, Six-Platform Analysis of Reliability
Doshi, AM, Tong, A, Davenport, MS, Khalaf, AM, Mresh, R, Rusinek, H, Schieda, N, Shinagare, AB, Smith, AD, Thornhill, R, Vikram, R, Chandarana, H, AJR Am J Roentgenol, 2021 Nov; DOI:10.2214/AJR.21.25456
PMID: 33852355
Automated measurements of body composition in abdominal CT scans using artificial intelligence can predict mortality in patients with cirrhosis
Zou, WY, Enchakalody, BE, Zhang, P, Shah, N, Saini, SD, Wang, NC, Wang, SC, Su, GL, Hepatol Commun, 2021 Nov; DOI:10.1002/hep4.1768
PMID: 34558818
Automatic Segmentation of Mandibular Ramus and Condyles
Le, C, Deleat-Besson, R, Prieto, J, Brosset, S, Dumont, M, Zhang, W, Cevidanes, L, Bianchi, J, Ruellas, A, Gomes, L, Gurgel, M, Massaro, C, Aliaga-Del Castillo, A, Yatabe, M, Benavides, E, Soki, F, Al Turkestani, N, Evangelista, K, Goncalves, J, Valladares-Neto, J, Annu Int Conf IEEE Eng Med Biol Soc, 2021 Nov; DOI:10.1109/EMBC46164.2021.9630727
PMID: 34891864
Feasibility of a deep learning-based method for automated localization of pelvic floor landmarks using stress MR images
Feng, F, Ashton-Miller, JA, DeLancey, JOL, Luo, J, Int Urogynecol J, 2021 Nov; DOI:10.1007/s00192-020-04626-5
PMID: 33475815
Early preclinical evaluation of a novel, computer aided designed, 3D printed, bioresorbable posterior cricoid scaffold
Michaels, R, Ramaraju, H, Crotts, SJ, Hollister, SJ, Zopf, DA, Int J Pediatr Otorhinolaryngol, 2021 Nov; DOI:10.1016/j.ijporl.2021.110892
PMID: 34507091
Reinventing Yourself Virtually: Fifth Annual Society of Asian Academic Surgeons Virtual Conference
Somasundar, T, Dimick, JB, Wong, SL, Gosain, A, Zheng, F, Lee, WPA, Yip, L, Brahmbhatt, TS, J Surg Res, 2021 Nov; DOI:10.1016/j.jss.2021.06.019
PMID: 34271268
Nanopore sequencing technology, bioinformatics and applications.
Wang, Y, Zhao, Y, Bollas, A, Wang, Y, Au, KF, Nat Biotechnol, 2021 Nov; DOI:10.1038/s41587-021-01108-x
PMID: 34750572
Blind Primed Supervised (BLIPS) Learning for MR Image Reconstruction
Lahiri, A, Wang, G, Ravishankar, S, Fessler, JA, IEEE Trans Med Imaging, 2021 Nov; DOI:10.1109/TMI.2021.3093770
PMID: 34191725
Executive Summary: Surviving Sepsis Campaign: International Guidelines for the Management of Sepsis and Septic Shock 2021
Evans, L, Rhodes, A, Alhazzani, W, Antonelli, M, Coopersmith, CM, French, C, Machado, FR, Mcintyre, L, Ostermann, M, Prescott, HC, Schorr, C, Simpson, S, Joost Wiersinga, W, Alshamsi, F, Angus, DC, Arabi, Y, Azevedo, L, Beale, R, Beilman, G, Belley-Cote, E, Crit Care Med, 2021 Nov; DOI:10.1097/CCM.0000000000005357
PMID: 34643578
Exome sequencing and analysis of 454,787 UK Biobank participants
Backman, JD, Li, AH, Marcketta, A, Sun, D, Mbatchou, J, Kessler, MD, Benner, C, Liu, D, Locke, AE, Balasubramanian, S, Yadav, A, Banerjee, N, Gillies, CE, Damask, A, Liu, S, Bai, X, Hawes, A, Maxwell, E, Gurski, L, Watanabe, K, Nature, 2021 Nov; DOI:10.1038/s41586-021-04103-z
PMID: 34662886
Wearable device signals and home blood pressure data across age, sex, race, ethnicity, and clinical phenotypes in the Michigan Predictive Activity & Clinical Trajectories in Health (MIPACT) study: a prospective, community-based observational stud
Golbus, JR, Pescatore, NA, Nallamothu, BK, Shah, N, Kheterpal, S, Lancet Digit Health, 2021 Nov; DOI:10.1016/S2589-7500(21)00138-2
PMID: 34711377