Publications

ChatGPT, et al…Artificial Intelligence, Authorship, and Medical Publishing
Solomon, DH, Allen, KD, Katz, P, Sawalha, AH, Yelin, E, Arthritis Care Res (Hoboken), 2023 Jun; DOI:10.1002/acr.25113
PMID: 37036162
BigNeuron: a resource to benchmark and predict performance of algorithms for automated tracing of neurons in light microscopy datasets
Manubens-Gil, L, Zhou, Z, Chen, H, Ramanathan, A, Liu, X, Liu, Y, Bria, A, Gillette, T, Ruan, Z, Yang, J, Radojević, M, Zhao, T, Cheng, L, Qu, L, Liu, S, Bouchard, KE, Gu, L, Cai, W, Ji, S, Roysam, B, Nat Methods, 2023 Jun; DOI:10.1038/s41592-023-01848-5
PMID: 37069271
More than pretty pictures: 3-D treatment planning and conformal therapy
Fraass, BA, McShan, DL, Ten Haken, RK, Med Phys, 2023 Jun; DOI:10.1002/mp.16117
PMID: 36427855
Physician and Biomedical Scientist Harassment on Social Media during the COVID-19 Pandemic
Royan, R, Pendergrast, TR, Woitowich, NC, Trueger, NS, Wooten, L, Jain, S, Arora, VM, JAMA Netw Open, 2023 Jun; DOI:10.1001/jamanetworkopen.2023.18315
PMID: 37314808
Artificial Intelligence, Emerging Threats, and Diagnostic Advances-Highlights From ECCMID, Europe's Largest Infectious Disease Conference
JAMA, 2023 May; DOI:10.1001/jama.2023.6066
PMID: 37133896
Computational approaches for detecting disease-associated alternative splicing events
Liu, J, Lin, C-X, Zhang, X, Li, Z, Huang, W, Liu, J, Guan, Y, Li, H-D, Brief Bioinform, 2023 May; DOI:10.1093/bib/bbad106
PMID: 36987778
Scale-free dynamics in the core-periphery topography and task alignment decline from conscious to unconscious states
Klar, P, Çatal, Y, Langner, R, Huang, Z, Northoff, G, Commun Biol, 2023 May; DOI:10.1038/s42003-023-04879-y
PMID: 37161021
Restoring continuous finger function with temporarily paralyzed nonhuman primates using brain-machine interfaces
Nason-Tomaszewski, SR, Mender, MJ, Kennedy, E, Lambrecht, JM, Kilgore, KL, Chiravuri, S, Ganesh Kumar, N, Kung, TA, Willsey, MS, Chestek, CA, Patil, PG, J Neural Eng, 2023 May; DOI:10.1088/1741-2552/accf36
PMID: 37084719
Can we do better at measuring patient-reported outcomes after cranioplasty? A systematic review
Zaramo, TZ, Zelko, I, Ragland, D, Tunyi, J, Kaur, MN, Bajestani, N, Lee, CN, Chung, KC, Mitchell, K-AS, Neurosurg Rev, 2023 May; DOI:10.1007/s10143-023-02006-3
PMID: 37148399
Use of machine learning to assess the prognostic utility of radiomic features for in-hospital COVID-19 mortality
Sun, Y, Salerno, S, He, X, Pan, Z, Yang, E, Sujimongkol, C, Song, J, Wang, X, Han, P, Kang, J, Sjoding, MW, Jolly, S, Christiani, DC, Li, Y, Sci Rep, 2023 May; DOI:10.1038/s41598-023-34559-0
PMID: 37147440
Letter to the Editor regarding “Unexplained regression in Down syndrome: Management of 51 patients in an international patient database” by Santoro et al.
Palffy, A, Ghaziuddin, N, Am J Med Genet A, 2023 May; DOI:10.1002/ajmg.a.63117
PMID: 36598151
Off-resonance artifact correction for MRI: A review
Haskell, MW, Nielsen, J-F, Noll, DC, NMR Biomed, 2023 May; DOI:10.1002/nbm.4867
PMID: 36326709
Electronic health record enhancements that increased capture of home blood pressures among geriatric patients during pandemic-era virtual visits
Russell, AE, Khosrodad, N, Clark, S, Min, L, J Am Geriatr Soc, 2023 May; DOI:10.1111/jgs.18205
PMID: 36602155
Surgeons' Perspectives on Changing the Default Number of Doses for Opioid Prescriptions in Electronic Health Record Systems
Chua, K-P, Thorne, MC, Brummett, CM, DeJonckheere, M, JAMA Netw Open, 2023 May; DOI:10.1001/jamanetworkopen.2023.15633
PMID: 37234007
Video-Based Deep Learning to Detect Dyssynergic Defecation with 3D High-Definition Anorectal Manometry
Levy, JJ, Navas, CM, Chandra, JA, Christensen, BC, Vaickus, LJ, Curley, M, Chey, WD, Baker, JR, Shah, ED, Dig Dis Sci, 2023 May; DOI:10.1007/s10620-022-07759-3
PMID: 36401758
Challenges of re-irradiation: A call to arms for physicists - and radiotherapy vendors
Vasquez Osorio, E, Mayo, C, Jackson, A, Appelt, A, Radiother Oncol, 2023 May; DOI:10.1016/j.radonc.2023.109585
PMID: 36842664
A novel machine learning-based screening identifies statins as inhibitors of the calcium pump SERCA
Cruz-Cortés, C, Velasco-Saavedra, MA, Fernández-de Gortari, E, Guerrero-Serna, G, Aguayo-Ortiz, R, Espinoza-Fonseca, LM, J Biol Chem, 2023 May; DOI:10.1016/j.jbc.2023.104681
PMID: 37030504
Predicting short-term suicidal thoughts in adolescents using machine learning: Developing decision tools to identify daily level risk after hospitalization
Czyz, EK, Koo, HJ, Al-Dajani, N, King, CA, Nahum-Shani, I, Psychol Med, 2023 May; DOI:10.1017/S0033291721005006
PMID: 34879890
Diagnostic Algorithms for Pulmonary Embolism: Time to Eliminate Pretest Probability as a Gateway to D-dimer Testing?
Greineder, CF, Barnes, GD, Kabrhel, C, Ann Emerg Med, 2023 May; DOI:10.1016/j.annemergmed.2022.12.012
PMID: 36669925
A revision to the United States national ALS registry’s algorithm to improve Case-Ascertainment
Mehta, P, Raymond, J, Han, M, Punjani, R, Larson, T, Berry, JD, Brooks, BR, Oskarsson, B, Goutman, SA, Horton, K, Amyotroph Lateral Scler Frontotemporal Degener, 2023 May; DOI:10.1080/21678421.2022.2121168
PMID: 36194072
Natural Parameter Conditions for Singular Perturbations of Chemical and Biochemical Reaction Networks
Eilertsen, J, Schnell, S, Walcher, S, Bull Math Biol, 2023 Apr; DOI:10.1007/s11538-023-01150-7
PMID: 37101015
Putting the "big" in Big Data: Learning to Be Just as (Un)certain as a Clinician at EEG
Kaestner, E, Stacey, W, Neurology, 2023 Apr; DOI:10.1212/WNL.0000000000207224
PMID: 36878700
Exploring the Relationship between Privacy and Utility in Mobile Health: Algorithm Development and Validation via Simulations of Federated Learning, Differential Privacy, and External Attacks
Shen, A, Francisco, L, Sen, S, Tewari, A, J Med Internet Res, 2023 Apr; DOI:10.2196/43664
PMID: 37079370
High-throughput image analysis with deep learning captures heterogeneity and spatial relationships after kidney injury
McElliott, MC, Al-Suraimi, A, Telang, AC, Ference-Salo, JT, Chowdhury, M, Soofi, A, Dressler, GR, Beamish, JA, Sci Rep, 2023 Apr; DOI:10.1038/s41598-023-33433-3
PMID: 37076596
The ENCODE Imputation Challenge: a critical assessment of methods for cross-cell type imputation of epigenomic profiles
Schreiber, J, Boix, C, Wook Lee, J, Li, H, Guan, Y, Chang, C-C, Chang, J-C, Hawkins-Hooker, A, Schölkopf, B, Schweikert, G, Carulla, MR, Canakoglu, A, Guzzo, F, Nanni, L, Masseroli, M, Carman, MJ, Pinoli, P, Hong, C, Yip, KY, Spence, JP, Genome Biol, 2023 Apr; DOI:10.1186/s13059-023-02915-y
PMID: 37072822