Publications
TypeTE: A tool to genotype mobile element insertions from whole genome resequencing data
Goubert, C,
Thomas, J,
Payer, LM,
Kidd, JM,
Feusier, J,
Watkins, WS,
Burns, KH,
Jorde, LB,
Feschotte, C,
Nucleic Acids Res, 2020 Apr; DOI:10.1093/nar/gkaa074 Minimum Technical Data Elements for Liquid Biopsy Data Submitted to Public Databases
Febbo, PG,
Martin, A-M,
Scher, HI,
Barrett, JC,
Beaver, JA,
Beresford, PJ,
Blumenthal, GM,
Bramlett, K,
Compton, C,
Dittamore, R,
Eberhard, DA,
Edelstein, D,
Godsey, J,
Gruen, A,
Hanlon, SE,
Hicks, J,
Hovelson, D,
Hullings, M,
Johann, D,
Johnson, J,
Clin Pharmacol Ther, 2020 Apr; DOI:10.1002/cpt.1747 Validation of claims-based algorithms for psoriatic arthritis
Lee, H,
Ford, JA,
Jin, Y,
Cho, S-K,
Santiago Ortiz, AJ,
Tong, AY,
Kim, SC,
Pharmacoepidemiol Drug Saf, 2020 Apr; DOI:10.1002/pds.4950 Network and cellular mechanisms underlying heterogeneous excitatory/inhibitory balanced states
Wu, J,
Aton, SJ,
Booth, V,
Zochowski, M,
Eur J Neurosci, 2020 Apr; DOI:10.1111/ejn.14669 Classification of current procedural terminology codes from electronic health record data using machine learning
Burns, ML,
Mathis, MR,
Vandervest, J,
Tan, X,
Lu, B,
Colquhoun, DA,
Shah, N,
Kheterpal, S,
Saager, L,
Anesthesiology, 2020 Apr; DOI:10.1097/ALN.0000000000003150 Overdiagnosis and Lives Saved by Reflex Testing Men with Intermediate Prostate-Specific Antigen Levels
Gulati, R,
Morgan, TM,
A'mar, T,
Psutka, SP,
Tosoian, JJ,
Etzioni, R,
J Natl Cancer Inst, 2020 Apr; DOI:10.1093/jnci/djz127 Harnessing big ‘omics’ data and AI for drug discovery in hepatocellular carcinoma
Chen, B,
Garmire, L,
Calvisi, DF,
Chua, M-S,
Kelley, RK,
Chen, X,
Nat Rev Gastroenterol Hepatol, 2020 Apr; DOI:10.1038/s41575-019-0240-9 Ontologies in radiation oncology
Phillips, MH,
Serra, LM,
Dekker, A,
Ghosh, P,
Luk, SMH,
Kalet, A,
Mayo, C,
Phys Med, 2020 Apr; DOI:10.1016/j.ejmp.2020.03.017 Incorporating historical models with adaptive Bayesian updates
Boonstra, PS,
Barbaro, RP,
Biostatistics, 2020 Apr; DOI:10.1093/biostatistics/kxy053 Current state of opioid stewardship
Ardeljan, LD,
Waldfogel, JM,
Bicket, MC,
Hunsberger, JB,
Vecchione, TM,
Arwood, N,
Eid, A,
Hatfield, LA,
McNamara, L,
Duncan, R,
Nesbit, T,
Smith, J,
Tran, J,
Nesbit, SA,
Am J Health Syst Pharm, 2020 Apr; DOI:10.1093/ajhp/zxaa027 Utility of a Computerized ICD-10 Algorithm to Identify Idiosyncratic Drug-Induced Liver Injury Cases in the Electronic Medical Record
Yeboah-Korang, A,
Louissaint, J,
Tsung, I,
Prabhu, S,
Fontana, RJ,
Drug Saf, 2020 Apr; DOI:10.1007/s40264-019-00903-5 Healthcare utilization and cost burden among women with endometriosis by opioid prescription status in the first year after diagnosis: a retrospective claims database analysis
As-Sanie, S,
Soliman, AM,
Evans, K,
Erpelding, N,
Lanier, R,
Katz, NP,
J Med Econ, 2020 Apr; DOI:10.1080/13696998.2019.1707212 Dysregulated biodynamics in metabolic attractor systems precede the emergence of amyotrophic lateral sclerosis
Curtin, P,
Austin, C,
Curtin, A,
Gennings, C,
Figueroa-Romero, C,
Mikhail, KA,
Botero, TM,
Goutman, SA,
Feldman, EL,
Arora, M,
PLoS Comput Biol, 2020 Apr; DOI:10.1371/journal.pcbi.1007773 A Theoretical Framework for Understanding Creator-Consumer Information Interaction Behaviors in Healthcare Documentation Systems.
Appl Ergon, 2020 Apr; DOI:10.1016/j.apergo.2019.103034 The effect of sociodemographic factors on outcomes and time to discharge after bariatric operations
Guerra, ME,
Jean, RA,
Chiu, AS,
Johnson, DC,
Am J Surg, 2020 Apr; DOI:10.1016/j.amjsurg.2020.02.046 Patterns of glucocorticoid prescribing and provider-level variation in a commercially insured incident rheumatoid arthritis population: A retrospective cohort study
Wallace, BI,
Lin, P,
Kamdar, N,
Noureldin, M,
Hayward, R,
Fox, DA,
Curtis, JR,
Saag, KG,
Waljee, AK,
Semin Arthritis Rheum, 2020 Apr; DOI:10.1016/j.semarthrit.2019.09.002 Dynamic readmission prediction using routine postoperative laboratory results after radical cystectomy
Kirk, PS,
Liu, X,
Borza, T,
Li, BY,
Sessine, M,
Zhu, K,
Lesse, O,
Qin, Y,
Jacobs, B,
Urish, K,
Helm, J,
Gilbert, S,
Weizer, A,
Montgomery, J,
Hollenbeck, BK,
Lavieri, M,
Skolarus, TA,
Urol Oncol, 2020 Apr; DOI:10.1016/j.urolonc.2019.11.011 Weighted Manifold Alignment using Wave Kernel Signatures for Aligning Medical Image Datasets
Clough, JR,
Balfour, DR,
Cruz, G,
Marsden, PK,
Prieto, C,
Reader, AJ,
King, AP,
IEEE Trans Pattern Anal Mach Intell, 2020 Apr; DOI:10.1109/TPAMI.2019.2891600 DeepMSA: Constructing deep multiple sequence alignment to improve contact prediction and fold-recognition for distant-homology proteins
Zhang, C,
Zheng, W,
Mortuza, SM,
Li, Y,
Zhang, Y,
Bioinformatics, 2020 Apr; DOI:10.1093/bioinformatics/btz863 Machine Learning for Cancer Drug Combination
Wang, Z,
Li, H,
Guan, Y,
Clin Pharmacol Ther, 2020 Apr; DOI:10.1002/cpt.1773 DECT-MULTRA: Dual-Energy CT Image Decomposition with Learned Mixed Material Models and Efficient Clustering
Li, Z,
Ravishankar, S,
Long, Y,
Fessler, JA,
IEEE Trans Med Imaging, 2020 Apr; DOI:10.1109/TMI.2019.2946177 GAN and dual-input two-compartment model-based training of a neural network for robust quantification of contrast uptake rate in gadoxetic acid-enhanced MRI
Simeth, J,
Cao, Y,
Med Phys, 2020 Apr; DOI:10.1002/mp.14055 Assessing Real-Time Moderation for Developing Adaptive Mobile Health Interventions for Medical Interns: Micro-Randomized Trial.
NeCamp, T,
Sen, S,
Frank, E,
Walton, MA,
Ionides, EL,
Fang, Y,
Tewari, A,
Wu, Z,
J Med Internet Res, 2020 Mar; DOI:10.2196/15033 Towards noninvasive estimation of tumour pressure by utilising MR elastography and nonlinear biomechanical models: a simulation and phantom study
Fovargue, D,
Fiorito, M,
Capilnasiu, A,
Nordsletten, D,
Lee, J,
Sinkus, R,
Sci Rep, 2020 Mar; DOI:10.1038/s41598-020-62367-3 Integrative differential expression and gene set enrichment analysis using summary statistics for scRNA-seq studies
Ma, Y,
Sun, S,
Shang, X,
Keller, ET,
Chen, M,
Zhou, X,
Nat Commun, 2020 Mar; DOI:10.1038/s41467-020-15298-6 