Publications

Opportunities to address gaps in early detection and improve outcomes of liver cancer
McMahon, B, Cohen, C, Brown, RS, El-Serag, H, Ioannou, GN, Lok, AS, Roberts, LR, Singal, AG, Block, T, JNCI Cancer Spectr, 2023 May; DOI:10.1093/jncics/pkad034
PMID: 37144952
Dose prescription and reporting in stereotactic body radiotherapy: A multi-institutional study
Das, IJ, Yadav, P, Andersen, AD, Chen, ZJ, Huang, L, Langer, MP, Lee, C, Li, L, Popple, RA, Rice, RK, Schiff, PB, Zhu, TC, Abazeed, ME, Radiother Oncol, 2023 May; DOI:10.1016/j.radonc.2023.109571
PMID: 36822361
Federated learning enables big data for rare cancer boundary detection
Pati, S, Baid, U, Edwards, B, Sheller, M, Wang, S-H, Reina, GA, Foley, P, Gruzdev, A, Karkada, D, Davatzikos, C, Sako, C, Ghodasara, S, Bilello, M, Mohan, S, Vollmuth, P, Brugnara, G, Preetha, CJ, Sahm, F, Maier-Hein, K, Zenk, M, Nat Commun, 2022 Dec; DOI:10.1038/s41467-022-33407-5
PMID: 36470898
Determinants of telemedicine adoption among financially distressed patients with cancer during the COVID-19 pandemic: insights from a nationwide study.
Hassan, AM, Chu, CK, Liu, J, Angove, R, Rocque, G, Gallagher, KD, Momoh, AO, Caston, NE, Williams, CP, Wheeler, S, Butler, CE, Offodile, AC, Support Care Cancer, 2022 Sep; DOI:10.1007/s00520-022-07204-1
PMID: 35689108
Leveraging artificial intelligence to predict ERG gene fusion status in prostate cancer.
Dadhania, V, Gonzalez, D, Yousif, M, Cheng, J, Morgan, TM, Spratt, DE, Reichert, ZR, Mannan, R, Wang, X, Chinnaiyan, A, Cao, X, Dhanasekaran, SM, Chinnaiyan, AM, Pantanowitz, L, Mehra, R, BMC Cancer, 2022 May; DOI:10.1186/s12885-022-09559-4
PMID: 35513774
Computerized decision support for bladder cancer treatment response assessment in CT urography: effect on diagnostic accuracy in multi-institution multi-specialty study
Sun, D, Hadjiiski, L, Alva, A, Zakharia, Y, Joshi, M, Chan, H-P, Garje, R, Pomerantz, L, Elhag, D, Cohan, RH, Caoili, EM, Kerr, WT, Cha, KH, Kirova-Nedyalkova, G, Davenport, MS, Shankar, PR, Francis, IR, Shampain, K, Meyer, N, Barkmeier, D, Tomography, 2022 Mar; DOI:10.3390/tomography8020054
PMID: 35314631
LI-RADS Treatment Response Algorithm: Performance and Diagnostic Accuracy with Radiologic-Pathologic Correlation in Patients with SBRT Treated Hepatocellular Carcinoma.
Mendiratta-Lala, M, Aslam, A, Maturen, KE, Westerhoff, M, Maurino, C, Parikh, ND, Sun, Y, Sonnenday, CJ, Stein, EB, Shampain, KL, Kaza, RK, Cuneo, K, Masch, W, Do, RKG, Lawrence, TS, Owen, D, Int J Radiat Oncol Biol Phys, 2022 Mar; DOI:10.1016/j.ijrobp.2021.10.006
PMID: 34644607
Evaluation of Dose Accuracy in the Near-Surface Region for Whole Breast Irradiation Techniques in a Multi-institutional Consortium.
Moncion, A, Wilson, M, Ma, R, Marsh, R, Burmeister, J, Dryden, D, Lack, D, Grubb, M, Mayville, A, Jursinic, P, Dess, K, Kamp, J, Young, K, Dilworth, JT, Kestin, L, Jagsi, R, Mietzel, M, Vicini, F, Pierce, LJ, Moran, JM, Pract Radiat Oncol, 2022 Jan; DOI:10.1016/j.prro.2022.01.013
PMID: 35219880
Feasibility of function-guided lung treatment planning with parametric response mapping
Matrosic, CK, Owen, DR, Polan, D, Sun, Y, Jolly, S, Schonewolf, C, Schipper, M, Haken, RKT, Galban, CJ, Matuszak, M, J Appl Clin Med Phys, 2021 Nov; DOI:10.1002/acm2.13436
PMID: 34697884
The influence of tobacco load versus smoking status on outcomes following lobectomy for lung cancer in a statewide quality collaborative
Al Natour, RH, He, C, Clark, MJ, Welsh, R, Chang, AC, Adams, KN, J Thorac Cardiovasc Surg, 2021 Nov; DOI:10.1016/j.jtcvs.2020.10.162
PMID: 33558118
HUGO Gene Nomenclature Committee (HGNC) recommendations for the designation of gene fusions
Bruford, EA, Antonescu, CR, Carroll, AJ, Chinnaiyan, A, Cree, IA, Cross, NCP, Dalgleish, R, Gale, RP, Harrison, CJ, Hastings, RJ, Huret, J-L, Johansson, B, Le Beau, M, Mecucci, C, Mertens, F, Verhaak, R, Mitelman, F, Leukemia, 2021 Nov; DOI:10.1038/s41375-021-01436-6
PMID: 34615987
Proteogenomic characterization of pancreatic ductal adenocarcinoma
Cao, L, Huang, C, Cui Zhou, D, Hu, Y, Lih, TM, Savage, SR, Krug, K, Clark, DJ, Schnaubelt, M, Chen, L, da Veiga Leprevost, F, Eguez, RV, Yang, W, Pan, J, Wen, B, Dou, Y, Jiang, W, Liao, Y, Shi, Z, Terekhanova, NV, Cell, 2021 Sep; DOI:10.1016/j.cell.2021.08.023
PMID: 34534465
Chemotherapy-Induced Peripheral Neuropathy Detection via a Smartphone App: Cross-sectional Pilot Study
Chen, C-S, Kim, J, Garg, N, Guntupalli, H, Jagsi, R, Griggs, JJ, Sabel, M, Dorsch, MP, Callaghan, BC, Hertz, DL, JMIR Mhealth Uhealth, 2021 Jul; DOI:10.2196/27502
PMID: 36260403
New Nodal Staging for Primary Pancreatic Neuroendocrine Tumors: A Multi-institutional and National Data Analysis
Zhang, X-F, Xue, F, Dong, D-H, Lopez-Aguiar, AG, Poultsides, G, Makris, E, Rocha, F, Kanji, Z, Weber, S, Fisher, A, Fields, R, Krasnick, BA, Idrees, K, Smith, PM, Cho, C, Beems, M, Lv, Y, Maithel, SK, Pawlik, TM, Ann Surg, 2021 Jul; DOI:10.1097/SLA.0000000000003478
PMID: 31356277
Deep convolutional neural network with adversarial training for denoising digital breast east toosynthesis images.
Gao, M, Fessler, JA, Chan, H-P, IEEE Trans Med Imaging, 2021 Jul; DOI:10.1109/TMI.2021.3066896
PMID: 33729933
Risks of feature leakage and sample size dependencies in deep feature extraction for breast mass classification.
Samala, RK, Chan, H-P, Hadjiiski, L, Helvie, MA, Med Phys, 2021 Jun; DOI:10.1002/mp.14678
PMID: 33368376
Survival benefit with adjuvant radiotherapy after resection of distal cholangiocarcinoma: A propensity-matched National Cancer Database analysis
Kamarajah, SK, Bednar, F, Cho, CS, Nathan, H, Cancer, 2021 Apr; DOI:10.1002/cncr.33356
PMID: 33320344
Modeling intra-fractional abdominal configuration changes using breathing motion-corrected radial MRI
Liu, L, Johansson, A, Cao, Y, Kashani, R, Lawrence, TS, Balter, JM, Phys Med Biol, 2021 Apr; DOI:10.1088/1361-6560/abef42
PMID: 33725676
Proteogenomic and metabolomic characterization of human glioblastoma
Wang, L-B, Karpova, A, Gritsenko, MA, Kyle, JE, Cao, S, Li, Y, Rykunov, D, Colaprico, A, Rothstein, JH, Hong, R, Stathias, V, Cornwell, M, Petralia, F, Wu, Y, Reva, B, Krug, K, Pugliese, P, Kawaler, E, Olsen, LK, Liang, W-W, Cancer Cell, 2021 Apr; DOI:10.1016/j.ccell.2021.01.006
PMID: 33577785
Institutional-Level Differences in Quality and Outcomes of Lung Cancer Resections in the United States
Osarogiagbon, RU, Sineshaw, HM, Lin, CC, Jemal, A, Chest, 2021 Apr; DOI:10.1016/j.chest.2020.10.075
PMID: 33197400
Digital breast tomosynthesis slab thickness: Impact on reader performance and interpretation time.
Pujara, AC, Joe, AI, Patterson, SK, Neal, CH, Noroozian, M, Ma, T, Chan, H-P, Helvie, MA, Maturen, KE, Radiology, 2020 Dec; DOI:10.1148/radiol.2020192805
PMID: 33021891
Comparison of biopsy under-sampling and annual progression using hidden markov models to learn from prostate cancer active surveillance studies
Li, W, Denton, BT, Nieboer, D, Carroll, PR, Roobol, MJ, Morgan, TM, Movember Foundation’s Global Action Plan Prostate Cancer Active Surveillance (GAP3) consortium, Array, Cancer Med, 2020 Dec; DOI:10.1002/cam4.3549
PMID: 33159431
Discriminating pseudoprogression and true progression in diffuse infiltrating glioma using multi-parametric MRI data through deep learning
Lee, J, Wang, N, Turk, S, Mohammed, S, Lobo, R, Kim, J, Liao, E, Camelo-Piragua, S, Kim, M, Junck, L, Bapuraj, J, Srinivasan, A, Rao, A, Sci Rep, 2020 Nov; DOI:10.1038/s41598-020-77389-0
PMID: 33230285
An Adaptive Bayesian Design for Personalized Dosing in a Cancer Prevention Trial
Sen, A, Zhao, L, Djuric, Z, Turgeon, DK, Ruffin, MT, Smith, WL, Brenner, DE, Normolle, DP, Am J Prev Med, 2020 Oct; DOI:10.1016/j.amepre.2020.04.023
PMID: 32951684
Assessment of a Deep Learning Model to Predict Hepatocellular Carcinoma in Patients With Hepatitis C Cirrhosis
Ioannou, GN, Tang, W, Beste, LA, Tincopa, MA, Su, GL, Van, T, Tapper, EB, Singal, AG, Zhu, J, Waljee, AK, JAMA Netw Open, 2020 Sep; DOI:10.1001/jamanetworkopen.2020.15626
PMID: 32870314