Publications

Midterm Follow-up of a Novel Algorithm for Nonoperative Weber B Ankle Fractures
Rooney, E, Ruse, S, Talusan, P, Holmes, J, Walton, D, Foot Ankle Int, 2022 Nov; DOI:10.1177/10711007221123794
PMID: 36205392
Prediction of Postoperative Deterioration in Cardiac Surgery Patients Using Electronic Health Record and Physiologic Waveform Data
Mathis, MR, Engoren, MC, Williams, AM, Biesterveld, BE, Croteau, AJ, Cai, L, Kim, RB, Liu, G, Ward, KR, Najarian, K, Gryak, J, BCIL Collaborators Group, Array, Anesthesiology, 2022 Nov; DOI:10.1097/ALN.0000000000004345
PMID: 35950802
Data Science-Driven Analysis of Substrate-Permissive Diketopiperazine Reverse Prenyltransferase NotF: Applications in Protein Engineering and Cascade Biocatalytic Synthesis of (-)-Eurotiumin A
Kelly, SP, Shende, VV, Flynn, AR, Dan, Q, Ye, Y, Smith, JL, Tsukamoto, S, Sigman, MS, Sherman, DH, J Am Chem Soc, 2022 Oct; DOI:10.1021/jacs.2c06631
PMID: 36223664
Thinking about Social Media, Scientific Information, and Public Communication
Imperiale, MJ, Casadevall, A, mSphere, 2022 Oct; DOI:10.1128/msphere.00422-22
PMID: 36121158
Personalized Disease Prevention (PDP): study protocol for a cluster-randomized clinical trial
Taksler, GB, Le, P, Hu, B, Alberts, J, Flynn, AJ, Rothberg, MB, Trials, 2022 Oct; DOI:10.1186/s13063-022-06750-7
PMID: 36273151
Advances in Multimodality Imaging in Cardio-Oncology: JACC State-of-the-Art Review
Baldassarre, LA, Ganatra, S, Lopez-Mattei, J, Yang, EH, Zaha, VG, Wong, TC, Ayoub, C, DeCara, JM, Dent, S, Deswal, A, Ghosh, AK, Henry, M, Khemka, A, Leja, M, Rudski, L, Villarraga, HR, Liu, JE, Barac, A, Scherrer-Crosbie, M, ACC Cardio-Oncology and the ACC Imaging Councils, Array, J Am Coll Cardiol, 2022 Oct; DOI:10.1016/j.jacc.2022.08.743
PMID: 36229093
Implementation outcomes of the Structured and Codified SIG format in electronic prescription directions
Lester, CA, Flynn, AJ, Marshall, VD, Rochowiak, S, Bagian, JP, J Am Med Inform Assoc, 2022 Oct; DOI:10.1093/jamia/ocac124
PMID: 35927972
From the Eyeball Test to the Algorithm - Quality of Life, Disability Status, and Clinical Decision Making in Surgery
Binkley, CE, Reynolds, JM, Shuman, A, N Engl J Med, 2022 Oct; DOI:10.1056/NEJMms2207408
PMID: 36198184
Quiescence during burst suppression and postictal generalized EEG suppression are distinct patterns of activity
Kafashan, M, Brian Hickman, L, Labonte, AK, Huels, ER, Maybrier, H, Guay, CS, Subramanian, S, Farber, NB, Ching, S, Hogan, RE, Kelz, MB, Avidan, MS, Mashour, GA, Palanca, BJA, Clin Neurophysiol, 2022 Oct; DOI:10.1016/j.clinph.2022.07.493
PMID: 36030576
Prediction of extubation failure in the paediatric cardiac ICU using machine learning and high-frequency physiologic data
Rooney, SR, Reynolds, EL, Banerjee, M, Pasquali, SK, Charpie, JR, Gaies, MG, Owens, GE, Cardiol Young, 2022 Oct; DOI:10.1017/S1047951121004959
PMID: 34924086
I-TASSER-MTD: a deep-learning-based platform for multi-domain protein structure and function prediction
Zhou, X, Zheng, W, Li, Y, Pearce, R, Zhang, C, Bell, EW, Zhang, G, Zhang, Y, Nat Protoc, 2022 Oct; DOI:10.1038/s41596-022-00728-0
PMID: 35931779
Direct incorporation of patient-specific efficacy and toxicity estimates in radiation therapy plan optimization
Polan, DF, Epelman, MA, Wu, VW, Sun, Y, Varsta, M, Owen, DR, Jarema, D, Matrosic, CK, Jolly, S, Schonewolf, CA, Schipper, MJ, Matuszak, MM, Med Phys, 2022 Oct; DOI:10.1002/mp.15940
PMID: 35994026
Current status and future developments in predicting outcomes in radiation oncology.
Niraula, D, Cui, S, Pakela, J, Wei, L, Luo, Y, Ten Haken, RK, El Naqa, I, Br J Radiol, 2022 Oct; DOI:10.1259/bjr.20220239
PMID: 35867841
Development of A Natural Language Processing Algorithm to Extract Seizure Types and Frequencies from the Electronic Health Record
Decker, BM, Turco, A, Xu, J, Terman, SW, Kosaraju, N, Jamil, A, Davis, KA, Litt, B, Ellis, CA, Khankhanian, P, Hill, CE, Seizure, 2022 Oct; DOI:10.1016/j.seizure.2022.07.010
PMID: 35882104
Multicriteria Optimization in Brachytherapy
Beaulieu, L, Al-Hallaq, H, Rosen, BS, Carlson, DJ, Int J Radiat Oncol Biol Phys, 2022 Oct; DOI:10.1016/j.ijrobp.2022.05.022
PMID: 36055313
Computational Methods for Single-cell Multi-omics Integration and Alignment
Stanojevic, S, Li, Y, Ristivojevic, A, Garmire, LX, Genomics Proteomics Bioinformatics, 2022 Oct; DOI:10.1016/j.gpb.2022.11.013
PMID: 36581065
SurvMaximin: Robust federated approach to transporting survival risk prediction models
Wang, X, Zhang, HG, Xiong, X, Hong, C, Weber, GM, Brat, GA, Bonzel, C-L, Luo, Y, Duan, R, Palmer, NP, Hutch, MR, Gutiérrez-Sacristán, A, Bellazzi, R, Chiovato, L, Cho, K, Dagliati, A, Estiri, H, García-Barrio, N, Griffier, R, Hanauer, DA, J Biomed Inform, 2022 Oct; DOI:10.1016/j.jbi.2022.104176
PMID: 36007785
State-of-the art training in neonatal resuscitation
Halamek, LP, Weiner, GM, Semin Perinatol, 2022 Oct; DOI:10.1016/j.semperi.2022.151628
PMID: 35717245
Enhancing Resilience in Family Caregivers Using an mHealth App
Smealie, E, Rosenthal, L, Johnson, A, Roslin, C, Hassett, AL, Choi, SW, Appl Clin Inform, 2022 Oct; DOI:10.1055/a-1967-8721
PMID: 36283418
Artificial Intelligence for Outcome Modeling in Radiotherapy
Cui, S, Hope, A, Dilling, TJ, Dawson, LA, Ten Haken, R, El Naqa, I, Semin Radiat Oncol, 2022 Oct; DOI:10.1016/j.semradonc.2022.06.005
PMID: 36202438
EnzymeML—a data exchange format for biocatalysis and enzymology
Range, J, Halupczok, C, Lohmann, J, Swainston, N, Kettner, C, Bergmann, FT, Weidemann, A, Wittig, U, Schnell, S, Pleiss, J, FEBS J, 2022 Oct; DOI:10.1111/febs.16318
PMID: 34890097
Clinical Predictors of Engagement in Teleintegrated Care and Telereferral Care for Complex Psychiatric Disorders in Primary Care: a Randomized Trial.
Severe, J, Pfeiffer, PN, Palm-Cruz, K, Hoeft, T, Sripada, R, Hawrilenko, M, Chen, S, Fortney, J, J Gen Intern Med, 2022 Oct; DOI:10.1007/s11606-021-07343-x
PMID: 35106719
TripletGO: Integrating Transcript Expression Profiles with Protein Homology Inferences for Gene Function Prediction
Zhu, Y-H, Zhang, C, Liu, Y, Omenn, GS, Freddolino, PL, Yu, D-J, Zhang, Y, Genomics Proteomics Bioinformatics, 2022 Oct; DOI:10.1016/j.gpb.2022.03.001
PMID: 35568117
Commentary: Robotic mitral valve surgery selection criteria: Screening algorithm or quantifying selection bias?
Mehaffey, JH, Hawkins, RB, J Thorac Cardiovasc Surg, 2022 Oct; DOI:10.1016/j.jtcvs.2020.12.053
PMID: 33500132
Employing Smartphone Health Apps in Weight Management for Adolescents: Analysis on Experiences and Perspectives From Pediatric Providers
Wen, X, Nguyen, LN, Kowalski-Dobson, TM, Mohammed, L, Woolford, SJ, Clin Pediatr (Phila), 2022 Oct; DOI:10.1177/00099228221097277
PMID: 35581724